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| -Genomic Data for Yap1 |
Links |
- Protein
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- UniPROBE Accession Number
- UP00327
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- Species
- Saccharomyces cerevisiae
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- Domain
- bZIP
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- Swiss-Prot
- P19880
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- Name and Synonyms
- Name: None Available.
Synonyms:AP-1-like transcription factor YAP1, PAR1, PDR4, Phenanthroline resistance protein PAR1, Pleiotropic drug resistance protein PDR4, SNQ3, YM9571.12, YML007W
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- IHOP
- 35120
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- NCBI RefSeq
- NP_013707
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- Description
- Basic leucine zipper (bZIP) transcription factor required for oxidative stress tolerance; mediates pleiotropic drug and metal resistance; localized to the nucleus in response to the presence of oxi...
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- JASPAR
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None Available
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| -PBM Motif Data for Yap1 |
- PBM-Derived DNA Binding Site Motif
(Seed-And-Wobble)
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- PWM
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Save
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- Top Kmer
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TTACGTAA E.S. 0.499
TTACGTAA E.S. 0.499
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- PBM-Derived DNA Binding Site Motif
(BEEML-PBM) (AMADID # 015681)
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- PWM
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Save
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- Consensus
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NMTKABNHNN
NNDNVTMAKN
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- Downloads
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Download the
zip
of all Yap1 PBM files
or view the downloads directory for individual files.
Please note that the files which include probe sequence data are protected by an academic research use license,
which can be viewed here.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Yap1
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=327&sourceDB=uniprobe
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| -Yap1 Datasets |
| Gene |
Clone Type |
Last Modified |
Save |
View |
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Yap1 |
Full length clone |
2014-07-16 |
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- Yap1 Insert Sequence
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1 MSVSTAKRSL DVVSPGSLAE FEGSKSRHDE IENEHRRTGT RDGEDSEQPK
51 KKGSKTSKKQ DLDPETKQKR TAQNRAAQRA FRERKERKMK ELEKKVQSLE
101 SIQQQNEVEA TFLRDQLITL VNELKKYRPE TRNDSKVLEY LARRDPNLHF
151 SKNNVNHSNS EPIDTPNDDI QENVKQKMNF TFQYPLDNDN DNDNSKNVGK
201 QLPSPNDPSH SAPMPINQTQ KKLSDATDSS SATLDSLSNS NDVLNNTPNS
251 STSMDWLDNV IYTNRFVSGD DGSNSKTKNL DSNMFSNDFN FENQFDEQVS
301 EFCSKMNQVC GTRQCPIPKK PISALDKEVF ASSSILSSNS PALTNTWESH
351 SNITDNTPAN VIATDATKYE NSFSGFGRLG FDMSANHYVV NDNSTGSTDS
401 TGSTGNKNKK NNNNSDDVLP FISESPFDMN QVTNFFSPGS TGIGNNAASN
451 TNPSLLQSSK EDIPFINANL AFPDDNSTNI QLQPFSESQS QNKFDYDMFF
501 RDSSKEGNNL FGEFLEDDDD DKKAANMSDD ESSLIKNQLI NEEPELPKQY
551 LQSVPGNESE ISQKNGSSLQ NADKINNGND NDNDNDVVPS KEGSLLRCSE
601 IWDRITTHPK YSDIDVDGLC SELMAKAKCS ERGVVINAED VQLALNKHMN
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- References
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Data are analyzed by array design with AMADID # in Zhu et al., Genome Res 2009
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